MolNFT v1 · #66992 · protein
Ethanolamine utilization microcompartment shell subunit, eutk C- terminal domain
3I71 · Ethanolamine utilization protein eutk: “Ethanolamine utilization microcompartment shell subunit, eutk C- terminal domain”. X-ray diffraction, 1 pocket (best druggability 0.37). MolNFT v1 #66992 on GenesisL1: 3D structure, binding…
- PDB
- 3I71
- Type
- protein
- Length
- 114 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ethanolamine utilization protein eutk
- UniProt
- P76540
- Pockets
- 1 · best druggability 0.37
Structure
x-ray diffraction · 2 distinct chains · 59% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ethanolamine utilization protein eutk | protein | 56 | 54% helix, 16% strand | P76540 |
| B | Ethanolamine utilization protein eutk | protein | 58 | 64% helix, 16% strand | P76540 |
Ligands and binding sites
- FLC · Citrate anion · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 115 | 0.37 | 0.74 | 20 | FLC |
Interfaces
1 interface between chains.
- A–B · 1503 Ų buried · 29 hydrogen bonds · protein-protein
Compared structures
- 3I71 · Ethanolamine Utilization Microcompartment Shell Subunit, EutK C-terminal domain · the same entry in another collection · chain A against A, TM-score 1.00
- P76540 · AlphaFold monomer V2.0 prediction for ethanolamine utilization protein eutk (P76540) · a predicted model of the same protein · chain A against A, TM-score 0.85
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P76540
- Elsewhere: RCSB PDB 3I71 · PDBe 3I71 · UniProt P76540
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