MolNFT v1 · #66838 · protein

Crystal structure of WD40 repeats protein WDR92

3I2N · Wd repeat-containing protein 92: “Crystal structure of WD40 repeats protein WDR92”. X-ray diffraction, 3 pockets (best druggability 0.78). MolNFT v1 #66838 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3I2N
Type: protein
Length: 345 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Wd repeat-containing protein 92
UniProt: Q96MX6
Pockets: 3 · best druggability 0.78

Structure

x-ray diffraction · 1 distinct chain · 1% helix, 53% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Wd repeat-containing protein 92	protein	345	1% helix, 53% strand	Q96MX6

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	521	0.78	0.85	57	empty
2	52	0.39	0.81	18	empty
3	50	0.34	0.78	12	empty

Compared structures

3I2N · Crystal Structure of WD40 repeats protein WDR92 · the same entry in another collection · chain A against A, TM-score 1.00
Q96MX6 · AlphaFold monomer V2.0 prediction for wd repeat-containing protein 92 (Q96MX6) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q96MX6
Elsewhere: RCSB PDB 3I2N · PDBe 3I2N · UniProt Q96MX6

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