MolNFT v1 · #6661 · protein
Crystal structure of E.COLI ybhb protein, a new member of the mammalian pebp family
1FJJ · Hypothetical 17.1 kda protein in modc-bioa intergenic region: “Crystal structure of E.COLI ybhb protein, a new member of the mammalian pebp family”. X-ray diffraction, 1 pocket (best druggability 0.46). MolNFT v1 #6661 on GenesisL1…
- PDB
- 1FJJ
- Type
- protein
- Length
- 159 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical 17.1 kda protein in modc-bioa intergenic region
- UniProt
- P12994
- Pockets
- 1 · best druggability 0.46
Structure
x-ray diffraction · 1 distinct chain · 11% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hypothetical 17.1 kda protein in modc-bioa intergenic region | protein | 159 | 11% helix, 35% strand | P12994 |
Ligands and binding sites
- EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 100 | 0.46 | 0.79 | 19 | EPE |
Modifications
Observed in the structure: 5 modified (engineered).
Compared structures
- 1FJJ · Crystal structure of E.COLI ybhb protein, a new member of the mammalian pebp family · the same entry in another collection · chain A against A, TM-score 1.00
- P12994 · AlphaFold monomer V2.0 prediction for UPF0098 protein ybhb (P12994) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P12994
- Elsewhere: RCSB PDB 1FJJ · PDBe 1FJJ · UniProt P12994
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