MolNFT v1 · #65868 · protein
Crystal structure of para-aminobenzoate synthetase, component I from cytophaga hutchinsonii
3H9M · P-aminobenzoate synthetase, component I: “Crystal structure of para-aminobenzoate synthetase, component I from cytophaga hutchinsonii”. X-ray diffraction, 2 pockets (best druggability 0.67). MolNFT v1 #65868 on GenesisL1: 3D…
- PDB
- 3H9M
- Type
- protein
- Length
- 399 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- P-aminobenzoate synthetase, component I
- EC
- 4.1.3.-
- UniProt
- Q11U39
- Pockets
- 2 · best druggability 0.67
Structure
x-ray diffraction · 1 distinct chain · 31% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | P-aminobenzoate synthetase, component I (EC 4.1.3.-) | protein | 399 | 31% helix, 32% strand | Q11U39 |
Ligands and binding sites
- DTU · (2R,3S)-1,4-dimercaptobutane-2,3-diol · additive · chains A
- PGE · Triethylene glycol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 357 | 0.67 | 0.81 | 36 | empty |
| 2 | 118 | 0.41 | 0.76 | 29 | empty |
Modifications
Observed in the structure: 9 modified (engineered).
Compared structures
- 3H9M · Crystal structure of para-aminobenzoate synthetase, component I from Cytophaga… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q11U39
- Elsewhere: RCSB PDB 3H9M · PDBe 3H9M · UniProt Q11U39
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