MolNFT v1 · #65495 · protein

Se-met RTT106P

3GYO · Histone chaperone RTT106: “Se-met RTT106P”. X-ray diffraction, 1 pocket (best druggability 0.31). MolNFT v1 #65495 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3GYO
Type: protein
Length: 225 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Histone chaperone RTT106
UniProt: P40161
Pockets: 1 · best druggability 0.31

Structure

x-ray diffraction · 1 distinct chain · 20% helix, 46% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Histone chaperone RTT106	protein	225	20% helix, 46% strand	P40161

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	50	0.31	0.77	14	empty

Modifications

Observed in the structure: 6 modified (engineered).

Compared structures

3GYO · Se-Met Rtt106p · the same entry in another collection · chain A against A, TM-score 1.00
P40161 · AlphaFold monomer V2.0 prediction for histone chaperone RTT106 (P40161) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P40161
Elsewhere: RCSB PDB 3GYO · PDBe 3GYO · UniProt P40161

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