MolNFT v1 · #65416 · protein

2.1 ångström crystal structure of 3-oxoacyl-(acyl-carrier-protein) synthase III

3GWE: “2.1 ångström crystal structure of 3-oxoacyl-(acyl-carrier-protein) synthase III”. X-ray diffraction, 5 pockets (best druggability 0.74). MolNFT v1 #65416 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3GWE
Type: protein
Length: 678 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 3-oxoacyl-(acyl-carrier-protein) synthase III
UniProt: Q3JY40
Pockets: 5 · best druggability 0.74

Structure

x-ray diffraction · 2 distinct chains · 36% helix, 27% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	3-oxoacyl-(acyl-carrier-protein) synthase III	protein	341	37% helix, 27% strand	Q3JY40
B	3-oxoacyl-(acyl-carrier-protein) synthase III	protein	337	36% helix, 26% strand	Q3JY40

Pockets

5 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	70	0.74	0.99	22	empty
2	178	0.61	0.83	32	empty
3	229	0.60	0.80	38	empty
4	248	0.58	0.78	35	empty
5	60	0.31	0.76	15	empty

Interfaces

1 interface between chains.

A–B · 2848 Å² buried · 48 hydrogen bonds · protein-protein

Compared structures

3GWE · 2.1 Angstrom crystal structure of 3-oxoacyl-(acyl-carrier-protein) synthase III · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q3JY40
Elsewhere: RCSB PDB 3GWE · PDBe 3GWE · UniProt Q3JY40

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