MolNFT v1 · #65373 · protein
Crystal structure of human chromobox homolog 6 (CBX6) with H3K9 peptide
3GV6 · Chromobox protein homolog 6: “Crystal structure of human chromobox homolog 6 (CBX6) with H3K9 peptide”. X-ray diffraction. MolNFT v1 #65373 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3GV6
- Type
- protein
- Length
- 62 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Chromobox protein homolog 6; Histone H3K9ME3 peptide
- UniProt
- O95503, Q92133
Structure
x-ray diffraction · 2 distinct chains · 29% helix, 50% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Chromobox protein homolog 6 | protein | 56 | 32% helix, 48% strand | O95503 |
| B | Histone H3K9ME3 peptide | protein | 6 | 0% helix, 67% strand | Q92133 |
Interfaces
1 interface between chains.
- A–B · 661 Ų buried · 21 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 1 modified (methylation).
Compared structures
- 3GV6 · Crystal Structure of human chromobox homolog 6 (CBX6) with H3K9 peptide · the same entry in another collection · chain A against A, TM-score 1.00
- O95503 · AlphaFold monomer V2.0 prediction for chromobox protein homolog 6 (O95503) · a predicted model of the same protein · chain A against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O95503
- Every structure of UniProt Q92133
- Elsewhere: RCSB PDB 3GV6 · PDBe 3GV6 · UniProt O95503 · UniProt Q92133
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