MolNFT v1 · #65099 · protein

Crystal structure of a putative protein-disulfide isomerase from pseudomonas syringae to 2.5A resolution.

3GN3: “Crystal structure of a putative protein-disulfide isomerase from pseudomonas syringae to 2.5A resolution.”. X-ray diffraction, 1 ligand (SO4), 1 pocket (best druggability 0.47). MolNFT v1 #65099 on GenesisL1: 3D structure, binding…

PDB: 3GN3
Type: protein
Length: 358 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative protein-disulfide isomerase
UniProt: Q87W03
Ligands: SO4
Pockets: 1 · best druggability 0.47

Structure

x-ray diffraction · 1 distinct chain · 52% helix, 14% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Putative protein-disulfide isomerase	protein	179	52% helix, 14% strand	Q87W03

Ligands and binding sites

SO4 · Sulfate ion · ion · chains A
GOL · Glycerol · additive · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	51	0.47	0.85	11	empty

Interfaces

1 interface between chains.

A–B · 1513 Å² buried · 21 hydrogen bonds · protein-protein

Compared structures

3GN3 · Crystal structure of a putative protein-disulfide isomerase from Pseudomonas syringae to… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q87W03
Elsewhere: RCSB PDB 3GN3 · PDBe 3GN3 · UniProt Q87W03

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