MolNFT v1 · #64808 · protein
Donor strand complemented faeg monomer of F4 variant ad
3GEA · K88 fimbrial protein ad: “Donor strand complemented faeg monomer of F4 variant ad”. X-ray diffraction, 1 ligand (SO4), 2 pockets (best druggability 0.41). MolNFT v1 #64808 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 3GEA
- Type
- protein
- Length
- 535 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- K88 fimbrial protein ad
- UniProt
- P14191
- Ligands
- SO4
- Pockets
- 2 · best druggability 0.41
Structure
x-ray diffraction · 2 distinct chains · 9% helix, 44% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | K88 fimbrial protein ad | protein | 274 | 9% helix, 43% strand | P14191 |
| B | K88 fimbrial protein ad | protein | 261 | 10% helix, 45% strand | P14191 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 56 | 0.41 | 0.82 | 23 | empty |
| 2 | 76 | 0.33 | 0.75 | 21 | SO4 |
Interfaces
1 interface between chains.
- A–B · 682 Ų buried · 13 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P14191
- Elsewhere: RCSB PDB 3GEA · PDBe 3GEA · UniProt P14191
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