MolNFT v1 · #64363 · protein

Crystal structure of protein of unknown function with cystatin-like fold (YP_001022489.1) from methylobium petroleophilum PM1 at 1.45 a resolution

3G16 · Uncharacterized protein with cystatin-like fold: “Crystal structure of protein of unknown function with cystatin-like fold (YP_001022489.1) from methylobium…”. X-ray diffraction, 2 ligands (UNL, CL). MolNFT v1 #64363 on GenesisL1…

PDB: 3G16
Type: protein
Length: 308 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Uncharacterized protein with cystatin-like fold
UniProt: A2SL15
Ligands: UNL, CL

Structure

x-ray diffraction · 2 distinct chains · 25% helix, 36% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Uncharacterized protein with cystatin-like fold	protein	156	25% helix, 36% strand	A2SL15
B	Uncharacterized protein with cystatin-like fold	protein	152	26% helix, 37% strand	A2SL15

Ligands and binding sites

UNL · Unknown ligand · ligand · 2 copies · chains A, B
CL · Chloride ion · ion · 4 copies · chains A, B
GOL · Glycerol · additive · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–B · 2574 Å² buried · 57 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 7 modified (engineered).

Compared structures

3G16 · Crystal structure of protein of unknown function with cystatin-like fold (YP_001022489.1)… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A2SL15
Elsewhere: RCSB PDB 3G16 · PDBe 3G16 · UniProt A2SL15

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