MolNFT v1 · #63920 · protein
Crystal structure of the bacteriophage T4 tail sheath protein, protease resistant fragment GP18PR
3FO8 · Tail sheath protein GP18: “Crystal structure of the bacteriophage T4 tail sheath protein, protease resistant fragment GP18PR”. X-ray diffraction, 4 pockets (best druggability 0.44). MolNFT v1 #63920 on GenesisL1: 3D structure…
- PDB
- 3FO8
- Type
- protein
- Length
- 274 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Tail sheath protein GP18
- UniProt
- P13332
- Pockets
- 4 · best druggability 0.44
Structure
x-ray diffraction · 1 distinct chain · 21% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| D | Tail sheath protein GP18 | protein | 274 | 21% helix, 34% strand | P13332 |
Ligands and binding sites
- ACT · Acetate ion · additive · chains D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 140 | 0.44 | 0.76 | 25 | empty |
| 2 | 131 | 0.42 | 0.76 | 28 | empty |
| 3 | 51 | 0.29 | 0.75 | 11 | empty |
| 4 | 54 | 0.25 | 0.72 | 15 | empty |
Compared structures
- 3FO8 · Crystal structure of the bacteriophage T4 tail sheath protein, protease resistant… · the same entry in another collection · chain D against D, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P13332
- Elsewhere: RCSB PDB 3FO8 · PDBe 3FO8 · UniProt P13332
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