MolNFT v1 · #63100 · protein

Partition protein

3EZ9 · Para: “Partition protein”. X-ray diffraction, 1 ligand (MG), 5 pockets (best druggability 0.62). MolNFT v1 #63100 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3EZ9
Type: protein
Length: 699 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Para
UniProt: B4ABW6
Ligands: MG
Pockets: 5 · best druggability 0.62

Structure

x-ray diffraction · 2 distinct chains · 49% helix, 13% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Para	protein	349	53% helix, 13% strand	B4ABW6
B	Para	protein	350	46% helix, 13% strand	B4ABW6

Ligands and binding sites

MG · Magnesium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	452	0.62	0.76	47	empty
2	420	0.58	0.74	35	empty
3	69	0.36	0.77	19	empty
4	65	0.31	0.75	15	empty
5	52	0.27	0.74	14	empty

Compared structures

3EZ9 · Partition Protein · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt B4ABW6
Elsewhere: RCSB PDB 3EZ9 · PDBe 3EZ9 · UniProt B4ABW6

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