MolNFT v1 · #62873 · protein

Crystal structure of an uncharacterized protein from erwinia carotovora subsp. atroseptica. northeast structural genomics target EWR179

3ESI: “Crystal structure of an uncharacterized protein from erwinia carotovora subsp. atroseptica. northeast…”. X-ray diffraction, 1 pocket (best druggability 0.87). MolNFT v1 #62873 on GenesisL1: 3D structure, binding sites and pockets in…

PDB: 3ESI
Type: protein
Length: 496 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Uncharacterized protein
UniProt: Q6CYK7
Pockets: 1 · best druggability 0.87

Structure

x-ray diffraction · 1 distinct chain · 15% helix, 48% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B, C, D	Uncharacterized protein	protein	124	15% helix, 48% strand	Q6CYK7

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	839	0.87	0.89	45	empty

Interfaces

6 interfaces between chains.

C–D · 769 Å² buried · 0 hydrogen bonds · protein-protein
A–B · 766 Å² buried · 0 hydrogen bonds · protein-protein
B–D · 472 Å² buried · 3 hydrogen bonds · protein-protein
A–C · 471 Å² buried · 3 hydrogen bonds · protein-protein
B–C · 144 Å² buried · 0 hydrogen bonds · protein-protein

Compared structures

3ESI · Crystal structure of an uncharacterized protein from Erwinia carotovora subsp.… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6CYK7
Elsewhere: RCSB PDB 3ESI · PDBe 3ESI · UniProt Q6CYK7

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