MolNFT v1 · #62785 · protein
Crystal structure of STM2138, a novel virulence chaperone in salmonella
3EPU · STM2138 virulence chaperone: “Crystal structure of STM2138, a novel virulence chaperone in salmonella”. X-ray diffraction, 3 pockets (best druggability 0.47). MolNFT v1 #62785 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 3EPU
- Type
- protein
- Length
- 267 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- STM2138 virulence chaperone
- UniProt
- Q8ZNP3
- Pockets
- 3 · best druggability 0.47
Structure
x-ray diffraction · 2 distinct chains · 39% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | STM2138 virulence chaperone | protein | 134 | 36% helix, 26% strand | Q8ZNP3 |
| B | STM2138 virulence chaperone | protein | 133 | 41% helix, 31% strand | Q8ZNP3 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 165 | 0.47 | 0.77 | 31 | empty |
| 2 | 78 | 0.40 | 0.78 | 15 | empty |
| 3 | 64 | 0.29 | 0.74 | 17 | empty |
Interfaces
1 interface between chains.
- A–B · 1337 Ų buried · 19 hydrogen bonds · protein-protein
Compared structures
- 3EPU · Crystal Structure of STM2138, a novel virulence chaperone in Salmonella · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8ZNP3
- Elsewhere: RCSB PDB 3EPU · PDBe 3EPU · UniProt Q8ZNP3
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