MolNFT v1 · #62548 · protein

The 2.6 ångström crystal structure of chbp, the cif homologue from burkholderia pseudomallei

3EIT · Putative ATP/GTP binding protein: “The 2.6 ångström crystal structure of chbp, the cif homologue from burkholderia pseudomallei”. X-ray diffraction, 4 pockets (best druggability 0.86). MolNFT v1 #62548 on GenesisL1: 3D structure…

PDB: 3EIT
Type: protein
Length: 488 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative ATP/GTP binding protein
UniProt: Q63KH5
Pockets: 4 · best druggability 0.86

Structure

x-ray diffraction · 2 distinct chains · 48% helix, 13% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative ATP/GTP binding protein	protein	244	48% helix, 13% strand	Q63KH5
B	Putative ATP/GTP binding protein	protein	244	47% helix, 13% strand	Q63KH5

Pockets

4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1134	0.86	0.87	113	empty
2	52	0.36	0.80	13	empty
3	56	0.30	0.75	17	empty
4	55	0.29	0.75	14	empty

Interfaces

1 interface between chains.

A–B · 1462 Å² buried · 13 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 12 modified (engineered, oxidation).

Compared structures

3EIT · the 2.6 angstrom crystal structure of CHBP, the Cif Homologue from Burkholderia… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q63KH5
Elsewhere: RCSB PDB 3EIT · PDBe 3EIT · UniProt Q63KH5

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