MolNFT v1 · #6238 · protein

Combined rietveld and stereochemical restraint refinement of a protein

1F6H · Myoglobin (met): “Combined rietveld and stereochemical restraint refinement of a protein”. Powder diffraction, 1 ligand (HEM), 1 pocket (best druggability 0.77). MolNFT v1 #6238 on GenesisL1: 3D structure, binding sites and pockets…

PDB: 1F6H
Type: protein
Length: 153 residues
Chains: 1
Method: powder diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Myoglobin (met)
UniProt: P02185
Ligands: HEM
Pockets: 1 · best druggability 0.77

Structure

powder diffraction · 1 distinct chain · 57% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Myoglobin (met)	protein	153	57% helix, 0% strand	P02185

Ligands and binding sites

HEM · Protoporphyrin IX containing Fe · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	283	0.77	0.88	39	HEM

Compared structures

1F6H · Combined rietveld and stereochemical restraint refinement of a protein · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P02185
Elsewhere: RCSB PDB 1F6H · PDBe 1F6H · UniProt P02185

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