MolNFT v1 · #62281 · protein
Crystal structure of the human SENP7 catalytic domain
3EAY · Sentrin-specific protease 7: “Crystal structure of the human SENP7 catalytic domain”. X-ray diffraction, 1 ligand (SO4), 2 pockets (best druggability 0.41). MolNFT v1 #62281 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 3EAY
- Type
- protein
- Length
- 247 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Sentrin-specific protease 7
- EC
- 3.4.22.-
- UniProt
- Q9BQF6
- Ligands
- SO4
- Pockets
- 2 · best druggability 0.41
Structure
x-ray diffraction · 1 distinct chain · 40% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sentrin-specific protease 7 (EC 3.4.22.-) | protein | 247 | 40% helix, 16% strand | Q9BQF6 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 119 | 0.41 | 0.75 | 15 | empty |
| 2 | 65 | 0.29 | 0.73 | 19 | empty |
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9BQF6
- Elsewhere: RCSB PDB 3EAY · PDBe 3EAY · UniProt Q9BQF6
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