MolNFT v1 · #62277 · protein
Crystal structure of the pvcb (PA2255) protein from pseudomonas aeruginosa
3EAT · Pyoverdine biosynthesis protein pvcb: “Crystal structure of the pvcb (PA2255) protein from pseudomonas aeruginosa”. X-ray diffraction, 1 ligand (NA), 2 pockets (best druggability 0.56). MolNFT v1 #62277 on GenesisL1: 3D structure…
- PDB
- 3EAT
- Type
- protein
- Length
- 278 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Pyoverdine biosynthesis protein pvcb
- UniProt
- Q9I1L4
- Ligands
- NA
- Pockets
- 2 · best druggability 0.56
Structure
x-ray diffraction · 1 distinct chain · 19% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| X | Pyoverdine biosynthesis protein pvcb | protein | 278 | 19% helix, 35% strand | Q9I1L4 |
Ligands and binding sites
- NA · Sodium ion · metal · chains X
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 314 | 0.56 | 0.76 | 38 | empty |
| 2 | 50 | 0.28 | 0.75 | 16 | empty |
Compared structures
- 3EAT · Crystal structure of the PvcB (PA2255) protein from Pseudomonas aeruginosa · the same entry in another collection · chain X against X, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9I1L4
- Elsewhere: RCSB PDB 3EAT · PDBe 3EAT · UniProt Q9I1L4
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