MolNFT v1 · #6217 · RNA

Solution structure of the kissing dimer of H3 gacg stem-loop in the 5'-end dimerization signal of moloney murine leukemia virus genomic RNA

1F5U · RNA (5'- R(*GP*GP*UP*GP*GP*GP*AP*GP*AP*CP*GP*UP*CP*CP*CP*AP*…: “Solution structure of the kissing dimer of H3 gacg stem-loop in the 5'-end dimerization signal of moloney…”. Solution nmr. MolNFT v1 #6217 on GenesisL1: 3D structure…

PDB: 1F5U
Type: RNA
Length: 36 nucleotides
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: RNA (5'- R(*GP*GP*UP*GP*GP*GP*AP*GP*AP*CP*GP*UP*CP*CP*CP*AP*CP*C)-3')

Structure

solution nmr · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	RNA (5'- R(GPGPUPGPGPGPAPGPAPCPGPUPCPCPCPAPCPC)-3')	rna	18	—	—

Interfaces

1 interface between chains.

A–B · 247 Å² buried · 15 hydrogen bonds · nucleic-nucleic

Compared structures

1F5U · Solution structure of the kissing dimer of H3 gacg stem-loop in the 5'-end dimerization… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 1F5U · PDBe 1F5U

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