MolNFT v1 · #61549 · protein
X-ray structure of HIV-1 protease in situ product complex
3DOX: “X-ray structure of HIV-1 protease in situ product complex”. X-ray diffraction. MolNFT v1 #61549 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3DOX
- Type
- protein
- Length
- 205 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- HIV-1 protease; A peptide substrate-sqny; A peptide substrate-piv
- EC
- 3.4.23.16
- UniProt
- P04585
Structure
x-ray diffraction · 3 distinct chains · 7% helix, 54% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | HIV-1 protease (EC 3.4.23.16) | protein | 198 | 7% helix, 56% strand | P04585 |
| P | A peptide substrate-sqny | protein | 4 | 0% helix, 0% strand | — |
| Q | A peptide substrate-piv | protein | 3 | 0% helix, 0% strand | — |
Interfaces
3 interfaces between chains.
- A–P · 452 Ų buried · 18 hydrogen bonds · protein-protein
- A–Q · 352 Ų buried · 5 hydrogen bonds · protein-protein
- P–Q · 69 Ų buried · 1 hydrogen bond · protein-protein
Compared structures
- 3DOX · X-ray structure of HIV-1 protease in situ product complex · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P04585
- Elsewhere: RCSB PDB 3DOX · PDBe 3DOX · UniProt P04585
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.