MolNFT v1 · #61512 · protein

The N-terminal domain of ribosomal-protein-alanine acetyltransferase from clostridium acetobutylicum atcc 824

3DNS: “The N-terminal domain of ribosomal-protein-alanine acetyltransferase from clostridium acetobutylicum atcc 824”. X-ray diffraction, 3 pockets (best druggability 0.57). MolNFT v1 #61512 on GenesisL1: 3D structure, binding sites and…

PDB: 3DNS
Type: protein
Length: 260 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ribosomal-protein-alanine acetyltransferase
UniProt: Q97MP0
Pockets: 3 · best druggability 0.57

Structure

x-ray diffraction · 2 distinct chains · 22% helix, 48% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ribosomal-protein-alanine acetyltransferase	protein	131	21% helix, 48% strand	Q97MP0
B	Ribosomal-protein-alanine acetyltransferase	protein	129	22% helix, 47% strand	Q97MP0

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	278	0.57	0.77	50	empty
2	136	0.46	0.77	26	empty
3	54	0.33	0.77	16	empty

Interfaces

1 interface between chains.

A–B · 1025 Å² buried · 18 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 9 modified (engineered).

Compared structures

3DNS · The N-terminal domain of Ribosomal-protein-alanine acetyltransferase from Clostridium… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q97MP0
Elsewhere: RCSB PDB 3DNS · PDBe 3DNS · UniProt Q97MP0

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