MolNFT v1 · #61462 · protein
Crystal structure of a putative general stress family protein (XCC2264) from xanthomonas campestris pv. campestris at 2.30 a resolution
3DMB · Putative general stress protein 26 with a pnp-oxidase like…: “Crystal structure of a putative general stress family protein (XCC2264) from xanthomonas campestris pv.…”. X-ray diffraction, 3 pockets (best druggability 0.70). MolNFT…
- PDB
- 3DMB
- Type
- protein
- Length
- 425 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative general stress protein 26 with a pnp-oxidase like fold
- UniProt
- Q8P8H7
- Pockets
- 3 · best druggability 0.70
Structure
x-ray diffraction · 3 distinct chains · 25% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative general stress protein 26 with a pnp-oxidase like fold | protein | 146 | 24% helix, 34% strand | Q8P8H7 |
| B | Putative general stress protein 26 with a pnp-oxidase like fold | protein | 145 | 26% helix, 35% strand | Q8P8H7 |
| C | Putative general stress protein 26 with a pnp-oxidase like fold | protein | 134 | 25% helix, 37% strand | Q8P8H7 |
Pockets
3 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1173 | 0.70 | 0.75 | 96 | empty |
| 2 | 211 | 0.68 | 0.86 | 36 | empty |
| 3 | 271 | 0.54 | 0.76 | 30 | empty |
Interfaces
2 interfaces between chains.
- A–B · 1140 Ų buried · 11 hydrogen bonds · protein-protein
- A–C · 254 Ų buried · 0 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 11 modified (engineered).
Compared structures
- 3DMB · Crystal structure of a putative general stress family protein (xcc2264) from xanthomonas… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8P8H7
- Elsewhere: RCSB PDB 3DMB · PDBe 3DMB · UniProt Q8P8H7
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