MolNFT v1 · #61107 · protein

Crystal structure of ttk kinase domain

3DBQ · Dual specificity protein kinase ttk: “Crystal structure of ttk kinase domain”. X-ray diffraction, 2 pockets (best druggability 0.66). MolNFT v1 #61107 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3DBQ
Type: protein
Length: 259 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Dual specificity protein kinase ttk
EC: 2.7.12.1
UniProt: P33981
Pockets: 2 · best druggability 0.66

Structure

x-ray diffraction · 1 distinct chain · 38% helix, 19% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Dual specificity protein kinase ttk (EC 2.7.12.1)	protein	259	38% helix, 19% strand	P33981

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	299	0.66	0.82	33	empty
2	106	0.38	0.75	21	empty

Compared structures

3DBQ · Crystal structure of TTK kinase domain · the same entry in another collection · chain A against A, TM-score 1.00
P33981 · AlphaFold monomer V2.0 prediction for dual specificity protein kinase ttk (P33981) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P33981
Elsewhere: RCSB PDB 3DBQ · PDBe 3DBQ · UniProt P33981

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