MolNFT v1 · #60816 · protein
Crystal structure of a DUF3244 family protein with an immunoglobulin- like beta-sandwich fold (BVU_0276) from bacteroides vulgatus atcc 8482 at 1.70 a resolution
3D33 · Domain of unknown function with an immunoglobulin-like…: “Crystal structure of a DUF3244 family protein with an immunoglobulin- like beta-sandwich fold (BVU_0276) from…”. X-ray diffraction, 2 pockets (best druggability 0.51). MolNFT…
- PDB
- 3D33
- Type
- protein
- Length
- 187 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Domain of unknown function with an immunoglobulin-like beta-sandwich fold
- UniProt
- A6KX32
- Pockets
- 2 · best druggability 0.51
Structure
x-ray diffraction · 2 distinct chains · 3% helix, 59% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Domain of unknown function with an immunoglobulin-like beta-sandwich fold | protein | 94 | 3% helix, 59% strand | A6KX32 |
| B | Domain of unknown function with an immunoglobulin-like beta-sandwich fold | protein | 93 | 3% helix, 60% strand | A6KX32 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 192 | 0.51 | 0.78 | 32 | empty |
| 2 | 71 | 0.38 | 0.79 | 15 | empty |
Interfaces
1 interface between chains.
- A–B · 614 Ų buried · 8 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 4 modified (engineered).
Compared structures
- 3D33 · Crystal structure of a duf3244 family protein with an immunoglobulin-like beta-sandwich… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A6KX32
- Elsewhere: RCSB PDB 3D33 · PDBe 3D33 · UniProt A6KX32
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