MolNFT v1 · #60573 · protein

Crystal structure of the full length IPAH3

3CVR · Invasion plasmid antigen: “Crystal structure of the full length IPAH3”. X-ray diffraction, 2 pockets (best druggability 0.41). MolNFT v1 #60573 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3CVR
Type: protein
Length: 477 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Invasion plasmid antigen
EC: 6.3.2.-
UniProt: Q83RJ4
Pockets: 2 · best druggability 0.41

Structure

x-ray diffraction · 1 distinct chain · 43% helix, 7% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Invasion plasmid antigen (EC 6.3.2.-)	protein	477	43% helix, 7% strand	Q83RJ4

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	67	0.41	0.80	19	empty
2	50	0.40	0.82	14	empty

Modifications

Observed in the structure: 8 modified (engineered).

Compared structures

3CVR · Crystal structure of the full length IpaH3 · the same entry in another collection · chain A against A, TM-score 1.00
Q83RJ4 · AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase IPAH3 (Q83RJ4) · a predicted model of the same protein · chain A against A, TM-score 0.88

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q83RJ4
Elsewhere: RCSB PDB 3CVR · PDBe 3CVR · UniProt Q83RJ4

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