MolNFT v1 · #60557 · protein
Regulation of protein function: crystal packing interfaces and conformational dimerization
3CVB · Plastocyanin: “Regulation of protein function: crystal packing interfaces and conformational dimerization”. X-ray diffraction, 1 ligand (CU1). MolNFT v1 #60557 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3CVB
- Type
- protein
- Length
- 210 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Plastocyanin
- UniProt
- Q51883
- Ligands
- CU1
Structure
x-ray diffraction · 1 distinct chain · 12% helix, 45% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Plastocyanin | protein | 105 | 12% helix, 45% strand | Q51883 |
Ligands and binding sites
- CU1 · Copper (I) ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 134 Ų buried · 3 hydrogen bonds · protein-protein
Compared structures
- 3CVB · Regulation of Protein Function: Crystal Packing Interfaces and Conformational Dimerization · the same entry in another collection · chain A against A, TM-score 1.00
- Q51883 · AlphaFold monomer V2.0 prediction for plastocyanin (Q51883) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q51883
- Elsewhere: RCSB PDB 3CVB · PDBe 3CVB · UniProt Q51883
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