MolNFT v1 · #60319 · protein
Crystal structure of a chitinase from bacteroides thetaiotaomicron
3CO4: “Crystal structure of a chitinase from bacteroides thetaiotaomicron”. X-ray diffraction, 1 ligand (GCS), 1 pocket (best druggability 0.58). MolNFT v1 #60319 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3CO4
- Type
- protein
- Length
- 311 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Chitinase
- UniProt
- Q8A3X9
- Ligands
- GCS
- Pockets
- 1 · best druggability 0.58
Structure
x-ray diffraction · 1 distinct chain · 41% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Chitinase | protein | 311 | 41% helix, 20% strand | Q8A3X9 |
Ligands and binding sites
- GCS · 2-amino-2-deoxy-beta-D-glucopyranose · sugar · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 321 | 0.58 | 0.76 | 42 | empty |
Modifications
Observed in the structure: 6 modified (engineered).
Compared structures
- 3CO4 · Crystal structure of a chitinase from Bacteroides thetaiotaomicron · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8A3X9
- Elsewhere: RCSB PDB 3CO4 · PDBe 3CO4 · UniProt Q8A3X9
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