MolNFT v1 · #60058 · protein
Crystal structure of a susd homolog (BT_3984) from bacteroides thetaiotaomicron vpi-5482 at 1.70 a resolution
3CGH: “Crystal structure of a susd homolog (BT_3984) from bacteroides thetaiotaomicron vpi-5482 at 1.70 a resolution”. X-ray diffraction, 1 ligand (ZN), 1 pocket (best druggability 0.53). MolNFT v1 #60058 on GenesisL1: 3D structure…
- PDB
- 3CGH
- Type
- protein
- Length
- 507 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Susd homolog
- UniProt
- Q8A0N7
- Ligands
- ZN
- Pockets
- 1 · best druggability 0.53
Structure
x-ray diffraction · 1 distinct chain · 46% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Susd homolog | protein | 507 | 46% helix, 5% strand | Q8A0N7 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 110 | 0.53 | 0.83 | 30 | empty |
Modifications
Observed in the structure: 9 modified (engineered).
Compared structures
- 3CGH · Crystal structure of a susd homolog (bt_3984) from bacteroides thetaiotaomicron vpi-5482… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8A0N7
- Elsewhere: RCSB PDB 3CGH · PDBe 3CGH · UniProt Q8A0N7
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