MolNFT v1 · #59899 · protein

Cellular retinoic acid binding protein II in complex with a synthetic retinoic acid (ro-12 7310)

3CBS · Protein (crabp-II): “Cellular retinoic acid binding protein II in complex with a synthetic retinoic acid (ro-12 7310)”. X-ray diffraction, 1 ligand (R12), 1 pocket (best druggability 0.79). MolNFT v1 #59899 on GenesisL1: 3D…

PDB: 3CBS
Type: protein
Length: 137 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein (crabp-II)
UniProt: P29373
Ligands: R12
Pockets: 1 · best druggability 0.79

Structure

x-ray diffraction · 1 distinct chain · 12% helix, 54% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protein (crabp-II)	protein	137	12% helix, 54% strand	P29373

Ligands and binding sites

R12 · (2E,4E,6E,8E)-9-(4-hydroxy-2,3,6-trimethylphenyl)-3,7-dimethylnona-2,4,6,8-tetraenoic acid · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	290	0.79	0.90	41	R12

Compared structures

3CBS · Cellular retinoic acid binding protein II in complex with a synthetic retinoic acid… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P29373
Elsewhere: RCSB PDB 3CBS · PDBe 3CBS · UniProt P29373

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