MolNFT v1 · #5985 · protein

The crystal structure of nusb from mycobacterium tuberculosis

1EYV · N-utilizing substance protein B homolog: “The crystal structure of nusb from mycobacterium tuberculosis”. X-ray diffraction, 1 ligand (PO4), 4 pockets (best druggability 0.37). MolNFT v1 #5985 on GenesisL1: 3D structure, binding…

PDB: 1EYV
Type: protein
Length: 264 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: N-utilizing substance protein B homolog
UniProt: P95020
Ligands: PO4
Pockets: 4 · best druggability 0.37

Structure

x-ray diffraction · 2 distinct chains · 75% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	N-utilizing substance protein B homolog	protein	131	76% helix, 0% strand	P95020
B	N-utilizing substance protein B homolog	protein	133	74% helix, 0% strand	P95020

Ligands and binding sites

PO4 · Phosphate ion · ion · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	62	0.37	0.79	16	empty
2	52	0.32	0.77	13	empty
3	72	0.32	0.74	12	empty
4	58	0.29	0.74	13	empty

Interfaces

1 interface between chains.

A–B · 1100 Å² buried · 11 hydrogen bonds · protein-protein

Compared structures

1EYV · The crystal structure of nusb from mycobacterium tuberculosis · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P95020
Elsewhere: RCSB PDB 1EYV · PDBe 1EYV · UniProt P95020

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