MolNFT v1 · #59534 · protein
Crystal structure of E.COLI yaeq protein
3C0U · Uncharacterized protein yaeq: “Crystal structure of E.COLI yaeq protein”. X-ray diffraction, 2 ligands (SO4, CL), 3 pockets (best druggability 0.49). MolNFT v1 #59534 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3C0U
- Type
- protein
- Length
- 357 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein yaeq
- UniProt
- P0AA97
- Ligands
- SO4, CL
- Pockets
- 3 · best druggability 0.49
Structure
x-ray diffraction · 2 distinct chains · 25% helix, 40% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein yaeq | protein | 177 | 25% helix, 40% strand | P0AA97 |
| B | Uncharacterized protein yaeq | protein | 180 | 24% helix, 39% strand | P0AA97 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 78 | 0.49 | 0.83 | 16 | empty |
| 2 | 138 | 0.41 | 0.75 | 21 | empty |
| 3 | 128 | 0.39 | 0.74 | 21 | empty |
Interfaces
1 interface between chains.
- A–B · 597 Ų buried · 5 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 6 modified (engineered).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0AA97
- Elsewhere: RCSB PDB 3C0U · PDBe 3C0U · UniProt P0AA97
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