MolNFT v1 · #59506 · protein

X-ray structure of the aquaglyceroporin from plasmodium falciparum

3C02: “X-ray structure of the aquaglyceroporin from plasmodium falciparum”. X-ray diffraction, 1 pocket (best druggability 0.71). MolNFT v1 #59506 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3C02
Type: protein
Length: 242 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Aquaglyceroporin
UniProt: Q8WPZ6
Pockets: 1 · best druggability 0.71

Structure

x-ray diffraction · 1 distinct chain · 79% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Aquaglyceroporin	protein	242	79% helix, 0% strand	Q8WPZ6

Ligands and binding sites

GOL · Glycerol · additive · 5 copies · chains A
BOG · octyl beta-D-glucopyranoside · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	352	0.71	0.83	54	GOL

Compared structures

3C02 · X-ray structure of the aquaglyceroporin from Plasmodium falciparum · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8WPZ6
Elsewhere: RCSB PDB 3C02 · PDBe 3C02 · UniProt Q8WPZ6

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