MolNFT v1 · #59455 · protein

Crystal structure of B. subtilis levansucrase mutant E342A

3BYL: “Crystal structure of B. subtilis levansucrase mutant E342A”. X-ray diffraction, 2 pockets (best druggability 0.61). MolNFT v1 #59455 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3BYL
Type: protein
Length: 440 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Levansucrase
EC: 2.4.1.10
UniProt: P05655
Pockets: 2 · best druggability 0.61

Structure

x-ray diffraction · 1 distinct chain · 16% helix, 41% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Levansucrase (EC 2.4.1.10)	protein	440	16% helix, 41% strand	P05655

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	312	0.61	0.79	45	empty
2	51	0.30	0.77	19	empty

Compared structures

3BYL · Crystal structure of B. subtilis levansucrase mutant E342A · the same entry in another collection · chain A against A, TM-score 1.00
P05655 · AlphaFold monomer V2.0 prediction for levansucrase (P05655) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P05655
Elsewhere: RCSB PDB 3BYL · PDBe 3BYL · UniProt P05655

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