MolNFT v1 · #59377 · protein
Crystal structure of the clostridium limosum C3 exoenzyme
3BW8 · Mono-ADP-ribosyltransferase C3: “Crystal structure of the clostridium limosum C3 exoenzyme”. X-ray diffraction, 1 ligand (SO4), 2 pockets (best druggability 0.61). MolNFT v1 #59377 on GenesisL1: 3D structure, binding sites and…
- PDB
- 3BW8
- Type
- protein
- Length
- 406 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Mono-ADP-ribosyltransferase C3
- EC
- 2.4.2.-
- UniProt
- Q46134
- Ligands
- SO4
- Pockets
- 2 · best druggability 0.61
Structure
x-ray diffraction · 2 distinct chains · 38% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Mono-ADP-ribosyltransferase C3 (EC 2.4.2.-) | protein | 205 | 39% helix, 24% strand | Q46134 |
| B | Mono-ADP-ribosyltransferase C3 (EC 2.4.2.-) | protein | 201 | 37% helix, 25% strand | Q46134 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 472 | 0.61 | 0.75 | 55 | SO4 |
| 2 | 141 | 0.45 | 0.77 | 30 | empty |
Interfaces
1 interface between chains.
- A–B · 554 Ų buried · 11 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q46134
- Elsewhere: RCSB PDB 3BW8 · PDBe 3BW8 · UniProt Q46134
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.