MolNFT v1 · #59359 · protein

Manipulating the coupled folding and binding process drives affinity maturation in a protein-protein complex

3BVM · Enterotoxin type C-3: “Manipulating the coupled folding and binding process drives affinity maturation in a protein-protein complex”. X-ray diffraction, 1 ligand (ZN), 1 pocket (best druggability 0.37). MolNFT v1 #59359 on…

PDB: 3BVM
Type: protein
Length: 226 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Enterotoxin type C-3
UniProt: P0A0L5
Ligands: ZN
Pockets: 1 · best druggability 0.37

Structure

x-ray diffraction · 1 distinct chain · 21% helix, 36% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Enterotoxin type C-3	protein	226	21% helix, 36% strand	P0A0L5

Ligands and binding sites

ZN · Zinc ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	63	0.37	0.78	15	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

3BVM · Manipulating the coupled folding and binding process drives affinity maturation in a… · the same entry in another collection · chain A against A, TM-score 1.00
P0A0L5 · AlphaFold monomer V2.0 prediction for enterotoxin type C-3 (P0A0L5) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0A0L5
Elsewhere: RCSB PDB 3BVM · PDBe 3BVM · UniProt P0A0L5

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