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MolNFT v1 · #59242 · protein

Crystal structure of a putative DNA-binding protein from bacteroides fragilis

3BS3: “Crystal structure of a putative DNA-binding protein from bacteroides fragilis”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #59242 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
3BS3
Type
protein
Length
62 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Putative DNA-binding protein
UniProt
Q5LGD2
Ligands
SO4

Structure

x-ray diffraction · 1 distinct chain · 61% helix, 3% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
APutative DNA-binding proteinprotein6261% helix, 3% strandQ5LGD2

Ligands and binding sites

  • SO4 · Sulfate ion · ion · chains A
  • EDO · 1,2-ethanediol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 4 modified (engineered).

Compared structures

  • 3BS3 · Crystal structure of a putative DNA-binding protein from Bacteroides fragilis · the same entry in another collection · chain A against A, TM-score 1.00

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