MolNFT v1 · #59241 · protein
Crystal structure of monomine
3BS2 · Lipocalin: “Crystal structure of monomine”. X-ray diffraction, 1 pocket (best druggability 0.64). MolNFT v1 #59241 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3BS2
- Type
- protein
- Length
- 146 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Lipocalin
- UniProt
- Q09JX9
- Pockets
- 1 · best druggability 0.64
Structure
x-ray diffraction · 1 distinct chain · 15% helix, 40% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lipocalin | protein | 146 | 15% helix, 40% strand | Q09JX9 |
Ligands and binding sites
- GOL · Glycerol · additive · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 194 | 0.64 | 0.84 | 35 | GOL |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Compared structures
- 3BS2 · Crystal Structure of Monomine · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q09JX9
- Elsewhere: RCSB PDB 3BS2 · PDBe 3BS2 · UniProt Q09JX9
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