MolNFT v1 · #59123 · protein

Carbonic anhydrase from marine diatom thalassiosira weissflogii- cadmium bound domain 2 with acetate (CDCA1-R2)

3BOE · Cadmium-specific carbonic anhydrase: “Carbonic anhydrase from marine diatom thalassiosira weissflogii- cadmium bound domain 2 with acetate…”. X-ray diffraction, 1 ligand (CD), 1 pocket (best druggability 0.54). MolNFT v1 #59123 on…

PDB: 3BOE
Type: protein
Length: 209 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cadmium-specific carbonic anhydrase
EC: 4.2.1.1
UniProt: Q50EL4
Ligands: CD
Pockets: 1 · best druggability 0.54

Structure

x-ray diffraction · 1 distinct chain · 36% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cadmium-specific carbonic anhydrase (EC 4.2.1.1)	protein	209	36% helix, 20% strand	Q50EL4

Ligands and binding sites

CD · Cadmium ion · metal · chains A
ACT · Acetate ion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	71	0.54	0.86	33	ACT

Compared structures

3BOE · Carbonic anhydrase from marine diatom Thalassiosira weissflogii- cadmium bound domain 2… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q50EL4
Elsewhere: RCSB PDB 3BOE · PDBe 3BOE · UniProt Q50EL4

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