MolNFT v1 · #58998 · protein

Zinc-bound C-terminal domain of nikr

3BKF · Nickel-responsive regulator: “Zinc-bound C-terminal domain of nikr”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #58998 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3BKF
Type: protein
Length: 66 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Nickel-responsive regulator
UniProt: P0A6Z6
Ligands: ZN

Structure

x-ray diffraction · 1 distinct chain · 18% helix, 58% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Nickel-responsive regulator	protein	66	18% helix, 58% strand	P0A6Z6

Ligands and binding sites

ZN · Zinc ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

3BKF · Zinc-bound C-terminal Domain of NikR · the same entry in another collection · chain A against A, TM-score 1.00
P0A6Z6 · AlphaFold monomer V2.0 prediction for nickel-responsive regulator (P0A6Z6) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0A6Z6
Elsewhere: RCSB PDB 3BKF · PDBe 3BKF · UniProt P0A6Z6

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