MolNFT v1 · #58940 · protein
Structure of the dal-1 and TSLC1 (372-383) complex
3BIN · Band 4.1-like protein 3: “Structure of the dal-1 and TSLC1 (372-383) complex”. X-ray diffraction, 3 pockets (best druggability 0.69). MolNFT v1 #58940 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3BIN
- Type
- protein
- Length
- 288 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Band 4.1-like protein 3; Cell adhesion molecule 1
- UniProt
- Q9Y2J2, Q9BY67
- Pockets
- 3 · best druggability 0.69
Structure
x-ray diffraction · 2 distinct chains · 35% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Band 4.1-like protein 3 | protein | 281 | 36% helix, 26% strand | Q9Y2J2 |
| B | Cell adhesion molecule 1 | protein | 7 | 0% helix, 43% strand | Q9BY67 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 608 | 0.69 | 0.78 | 56 | empty |
| 2 | 114 | 0.44 | 0.78 | 24 | empty |
| 3 | 57 | 0.29 | 0.74 | 15 | empty |
Interfaces
1 interface between chains.
- A–B · 462 Ų buried · 13 hydrogen bonds · protein-protein
Compared structures
- 3BIN · Structure of the DAL-1 and TSLC1 (372-383) complex · the same entry in another collection · chain A against A, TM-score 1.00
- Q9Y2J2 · AlphaFold monomer V2.0 prediction for band 4.1-like protein 3 (Q9Y2J2) · a predicted model of the same protein · chain A against A, TM-score 0.98
- Q9BY67 · AlphaFold monomer V2.0 prediction for cell adhesion molecule 1 (Q9BY67) · a predicted model of the same protein · chain B against A, TM-score 0.68
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y2J2
- Every structure of UniProt Q9BY67
- Elsewhere: RCSB PDB 3BIN · PDBe 3BIN · UniProt Q9Y2J2 · UniProt Q9BY67
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