MolNFT v1 · #58844 · protein
Crystal structure of truncated fimg (fimgt) in complex with the donor strand peptide of fimf (dsf)
3BFQ · Protein fimg: “Crystal structure of truncated fimg (fimgt) in complex with the donor strand peptide of fimf (dsf)”. X-ray diffraction, 1 ligand (CO). MolNFT v1 #58844 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3BFQ
- Type
- protein
- Length
- 147 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein fimg; Protein fimf
- UniProt
- P08190, P08189
- Ligands
- CO
Structure
x-ray diffraction · 2 distinct chains · 2% helix, 53% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| G | Protein fimg | protein | 132 | 2% helix, 52% strand | P08190 |
| F | Protein fimf | protein | 15 | 0% helix, 67% strand | P08189 |
Ligands and binding sites
- CO · Cobalt (II) ion · metal · chains G
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- G–F · 1216 Ų buried · 32 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 3BFQ · Crystal structure of truncated FimG (FimGt) in complex with the donor strand peptide of… · the same entry in another collection · chain G against G, TM-score 1.00
- P08190 · AlphaFold monomer V2.0 prediction for protein fimg (P08190) · a predicted model of the same protein · chain G against A, TM-score 0.99
- P08189 · AlphaFold monomer V2.0 prediction for protein fimf (P08189) · a predicted model of the same protein · chain F against A, TM-score 0.47
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P08190
- Every structure of UniProt P08189
- Elsewhere: RCSB PDB 3BFQ · PDBe 3BFQ · UniProt P08190 · UniProt P08189
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