MolNFT v1 · #58603 · protein
Structure of fepe- bacterial polysaccharide co-polymerase
3B8N · Ferric enterobactin (enterochelin) transport: “Structure of fepe- bacterial polysaccharide co-polymerase”. X-ray diffraction, 20 pockets (best druggability 0.59). MolNFT v1 #58603 on GenesisL1: 3D structure, binding sites and…
- PDB
- 3B8N
- Type
- protein
- Length
- 2,169 residues
- Chains
- 9
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ferric enterobactin (enterochelin) transport
- UniProt
- Q8XBV8
- Pockets
- 20 · best druggability 0.59
Structure
x-ray diffraction · 1 distinct chain · 62% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E, F, G, H, I | Ferric enterobactin (enterochelin) transport | protein | 241 | 62% helix, 9% strand | Q8XBV8 |
Pockets
20 pockets found on a 1 Å grid, 14 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 374 | 0.59 | 0.76 | 38 | empty |
| 2 | 354 | 0.59 | 0.76 | 38 | empty |
| 3 | 325 | 0.58 | 0.77 | 35 | empty |
| 4 | 350 | 0.58 | 0.76 | 38 | empty |
| 5 | 361 | 0.58 | 0.76 | 39 | empty |
Interfaces
9 interfaces between chains.
- E–F · 2000 Ų buried · 22 hydrogen bonds · protein-protein
- H–I · 1979 Ų buried · 26 hydrogen bonds · protein-protein
- A–I · 1976 Ų buried · 20 hydrogen bonds · protein-protein
- D–E · 1970 Ų buried · 23 hydrogen bonds · protein-protein
- A–B · 1962 Ų buried · 22 hydrogen bonds · protein-protein
Compared structures
- 3B8N · Structure of FepE- Bacterial Polysaccharide Co-polymerase · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8XBV8
- Elsewhere: RCSB PDB 3B8N · PDBe 3B8N · UniProt Q8XBV8
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