MolNFT v1 · #58473 · protein
Crystal structure analysis of sulfolobus tokodaii STRAIN7 cytochrom P450
3B4X · 367AA long hypothetical cytochrome P450: “Crystal structure analysis of sulfolobus tokodaii STRAIN7 cytochrom P450”. X-ray diffraction, 1 ligand (HEM), 3 pockets (best druggability 0.85). MolNFT v1 #58473 on GenesisL1: 3D structure…
- PDB
- 3B4X
- Type
- protein
- Length
- 367 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 367AA long hypothetical cytochrome P450
- EC
- 1.14.14.1
- UniProt
- Q972I2
- Ligands
- HEM
- Pockets
- 3 · best druggability 0.85
Structure
x-ray diffraction · 1 distinct chain · 49% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 367AA long hypothetical cytochrome P450 (EC 1.14.14.1) | protein | 367 | 49% helix, 13% strand | Q972I2 |
Ligands and binding sites
- HEM · Protoporphyrin IX containing Fe · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 831 | 0.85 | 0.87 | 62 | HEM |
| 2 | 91 | 0.38 | 0.76 | 21 | empty |
| 3 | 65 | 0.33 | 0.75 | 17 | empty |
Compared structures
- 3B4X · Crystal Structure Analysis of Sulfolobus tokodaii strain7 cytochrom P450 · the same entry in another collection · chain A against A, TM-score 1.00
- Q972I2 · AlphaFold monomer V2.0 prediction for cytochrome P450 119 (Q972I2) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q972I2
- Elsewhere: RCSB PDB 3B4X · PDBe 3B4X · UniProt Q972I2
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