MolNFT v1 · #58383 · protein

Crystal structure of an S. thermophilus nfeob T35A mutant bound to GDP

3B1Y · Ferrous iron uptake transporter protein B: “Crystal structure of an S. thermophilus nfeob T35A mutant bound to GDP”. X-ray diffraction, 1 ligand (GNH), 1 pocket (best druggability 0.39). MolNFT v1 #58383 on GenesisL1: 3D structure…

PDB: 3B1Y
Type: protein
Length: 255 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ferrous iron uptake transporter protein B
UniProt: Q5M586
Ligands: GNH
Pockets: 1 · best druggability 0.39

Structure

x-ray diffraction · 1 distinct chain · 48% helix, 18% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ferrous iron uptake transporter protein B	protein	255	48% helix, 18% strand	Q5M586

Ligands and binding sites

GNH · Aminophosphonic acid-guanylate ester · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	56	0.39	0.81	17	empty

Compared structures

3B1Y · Crystal structure of an S. thermophilus NFeoB T35A mutant bound to GDP · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5M586
Elsewhere: RCSB PDB 3B1Y · PDBe 3B1Y · UniProt Q5M586

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