MolNFT v1 · #58301 · protein
Crystal structure of the soluble part of cytochrome B6F complex iron- sulfur subunit from thermosynechococcus elongatus bp-1
3AZC · Cytochrome B6-F complex iron-sulfur subunit: “Crystal structure of the soluble part of cytochrome B6F complex iron- sulfur subunit from thermosynechococcus…”. X-ray diffraction, 1 ligand (FES), 1 pocket (best druggability 0.38).…
- PDB
- 3AZC
- Type
- protein
- Length
- 133 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cytochrome B6-F complex iron-sulfur subunit
- EC
- 1.10.99.1
- UniProt
- P0C8N8
- Ligands
- FES
- Pockets
- 1 · best druggability 0.38
Structure
x-ray diffraction · 1 distinct chain · 6% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cytochrome B6-F complex iron-sulfur subunit (EC 1.10.99.1) | protein | 133 | 6% helix, 32% strand | P0C8N8 |
Ligands and binding sites
- FES · Fe2/s2 (inorganic) cluster · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 83 | 0.38 | 0.77 | 19 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 3AZC · Crystal structure of the soluble part of cytochrome b6f complex iron-sulfur subunit from… · the same entry in another collection · chain A against A, TM-score 1.00
- P0C8N8 · AlphaFold monomer V2.0 prediction for cytochrome B6-F complex iron- sulfur subunit… · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0C8N8
- Elsewhere: RCSB PDB 3AZC · PDBe 3AZC · UniProt P0C8N8
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