MolNFT v1 · #58048 · protein
Cl- binding hemoglobin component V form propsilocerus akamusi under 500 mm nacl at pH 4.6
3ARJ · Hemoglobin V: “Cl- binding hemoglobin component V form propsilocerus akamusi under 500 mm nacl at pH 4.6”. X-ray diffraction, 2 ligands (HEM, CL), 1 pocket (best druggability 0.70). MolNFT v1 #58048 on GenesisL1: 3D structure…
- PDB
- 3ARJ
- Type
- protein
- Length
- 152 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hemoglobin V
- UniProt
- Q7M422
- Ligands
- HEM, CL
- Pockets
- 1 · best druggability 0.70
Structure
x-ray diffraction · 1 distinct chain · 76% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hemoglobin V | protein | 152 | 76% helix, 0% strand | Q7M422 |
Ligands and binding sites
- HEM · Protoporphyrin IX containing Fe · ligand · chains A
- CL · Chloride ion · ion · 5 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 186 | 0.70 | 0.87 | 23 | HEM, CL |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 3ARJ · Cl- binding hemoglobin component V form Propsilocerus akamusi under 500 mM NaCl at pH 4.6 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7M422
- Elsewhere: RCSB PDB 3ARJ · PDBe 3ARJ · UniProt Q7M422
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