MolNFT v1 · #58003 · protein
Molecular insights into plant cell proliferation disturbance by agrobacterium protein 6B
3AQ2 · 6B protein: “Molecular insights into plant cell proliferation disturbance by agrobacterium protein 6B”. X-ray diffraction, 3 pockets (best druggability 0.78). MolNFT v1 #58003 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 3AQ2
- Type
- protein
- Length
- 376 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 6B protein
- UniProt
- Q44522
- Pockets
- 3 · best druggability 0.78
Structure
x-ray diffraction · 2 distinct chains · 25% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 6B protein | protein | 191 | 26% helix, 29% strand | Q44522 |
| B | 6B protein | protein | 185 | 24% helix, 30% strand | Q44522 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 682 | 0.78 | 0.83 | 70 | empty |
| 2 | 125 | 0.41 | 0.75 | 14 | empty |
| 3 | 52 | 0.29 | 0.75 | 16 | empty |
Interfaces
1 interface between chains.
- A–B · 786 Ų buried · 19 hydrogen bonds · protein-protein
Compared structures
- 3AQ2 · Molecular insights into plant cell proliferation disturbance by Agrobacterium protein 6b · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q44522
- Elsewhere: RCSB PDB 3AQ2 · PDBe 3AQ2 · UniProt Q44522
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