MolNFT v1 · #57625 · protein
Crystal structure of (pro-pro-GLY)4-hyp-ser-gly-(pro-pro-GLY)4
3ADM · Collagen-like peptide: “Crystal structure of (pro-pro-GLY)4-hyp-ser-gly-(pro-pro-GLY)4”. X-ray diffraction. MolNFT v1 #57625 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3ADM
- Type
- protein
- Length
- 160 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Collagen-like peptide
Structure
x-ray diffraction · 3 distinct chains · 0% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, E, F | Collagen-like peptide | protein | 27 | 0% helix, 0% strand | — |
| C | Collagen-like peptide | protein | 26 | 0% helix, 0% strand | — |
| D | Collagen-like peptide | protein | 26 | 0% helix, 0% strand | — |
Interfaces
12 interfaces between chains.
- A–B · 796 Ų buried · 10 hydrogen bonds · protein-protein
- E–F · 779 Ų buried · 10 hydrogen bonds · protein-protein
- D–F · 778 Ų buried · 9 hydrogen bonds · protein-protein
- A–C · 764 Ų buried · 9 hydrogen bonds · protein-protein
- D–E · 760 Ų buried · 9 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 6 modified (hydroxylation).
Compared structures
- 3ADM · Crystal structure of (Pro-Pro-Gly)4-Hyp-Ser-Gly-(Pro-Pro-Gly)4 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 3ADM · PDBe 3ADM
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