MolNFT v1 · #57505 · protein
Crystal structure of a hemoglobin component V from propsilocerus akamusi (PH9.0 coordinates)
3A9M · Hemoglobin V: “Crystal structure of a hemoglobin component V from propsilocerus akamusi (PH9.0 coordinates)”. X-ray diffraction, 2 ligands (HEM, CMO), 1 pocket (best druggability 0.67). MolNFT v1 #57505 on GenesisL1: 3D structure…
- PDB
- 3A9M
- Type
- protein
- Length
- 152 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hemoglobin V
- UniProt
- Q7M422
- Ligands
- HEM, CMO
- Pockets
- 1 · best druggability 0.67
Structure
x-ray diffraction · 1 distinct chain · 75% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hemoglobin V | protein | 152 | 75% helix, 0% strand | Q7M422 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 265 | 0.67 | 0.83 | 26 | HEM, CMO |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 3A9M · Crystal structure of a hemoglobin component V from Propsilocerus akamusi (pH9.0… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7M422
- Elsewhere: RCSB PDB 3A9M · PDBe 3A9M · UniProt Q7M422
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