MolNFT v1 · #57158 · DNA
1.3 a structure determination of the D(CG(5-BRU)ACG)2/6- bromo-9-amino-daca complex
366D · DNA (5'-D(*CP*GP*(BRU)P*AP*CP*G)-3'): “1.3 a structure determination of the D(CG(5-BRU)ACG)2/6- bromo-9-amino-daca complex”. X-ray diffraction, 1 ligand (DA6). MolNFT v1 #57158 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 366D
- Type
- DNA
- Length
- 6 nucleotides
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(*CP*GP*(BRU)P*AP*CP*G)-3')
- Ligands
- DA6
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA (5'-D(*CP*GP*(BRU)P*AP*CP*G)-3') | dna | 6 | — | — |
Ligands and binding sites
- DA6 · 6-bromo-9-amino-N-ethyl(diaminomethyl)acridine-4-carboxamide · ligand · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 modified (nucleotide modification).
Compared structures
- 366D · 1.3 a structure determination of the D(CG(5-BRU)ACG)2/6-bromo-9-amino-daca complex · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 366D · PDBe 366D
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